Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.52■□□□□ 0.88
CDHR4A6H8M9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDHR4A6H8M9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDHR4A6H8M9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDHR4A6H8M9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDHR4A6H8M9 AC233723.2-201ENST00000623798 2106 ntBASIC20.51■□□□□ 0.87
CDHR4A6H8M9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 AC010997.5-201ENST00000609182 354 ntBASIC20.51■□□□□ 0.87
CDHR4A6H8M9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDHR4A6H8M9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.5■□□□□ 0.87
CDHR4A6H8M9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 TSPY9P-201ENST00000440215 945 ntBASIC20.49■□□□□ 0.87
CDHR4A6H8M9 TSPY11P-201ENST00000442607 1045 ntBASIC20.49■□□□□ 0.87
CDHR4A6H8M9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDHR4A6H8M9 FP325331.1-202ENST00000623531 1380 ntBASIC20.48■□□□□ 0.87
CDHR4A6H8M9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.48■□□□□ 0.87
CDHR4A6H8M9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 LINC01529-204ENST00000636474 1715 ntBASIC20.47■□□□□ 0.87
CDHR4A6H8M9 AL117328.2-201ENST00000624617 1940 ntBASIC20.47■□□□□ 0.87
CDHR4A6H8M9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.47■□□□□ 0.87
CDHR4A6H8M9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDHR4A6H8M9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR4A6H8M9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR4A6H8M9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR4A6H8M9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDHR4A6H8M9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDHR4A6H8M9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDHR4A6H8M9 AC009102.2-201ENST00000606772 1639 ntBASIC20.45■□□□□ 0.87
CDHR4A6H8M9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDHR4A6H8M9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.44■□□□□ 0.86
CDHR4A6H8M9 UNC93B8-201ENST00000511903 705 ntBASIC20.44■□□□□ 0.86
CDHR4A6H8M9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 AL035685.1-201ENST00000636663 812 ntBASIC20.44■□□□□ 0.86
CDHR4A6H8M9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDHR4A6H8M9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms