Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AP005435.1-201ENST00000529293 1178 ntBASIC30.69■■■□□ 2.5
SBNO1A3KN83 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.69■■■□□ 2.5
SBNO1A3KN83 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.69■■■□□ 2.5
SBNO1A3KN83 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SBNO1A3KN83 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.69■■■□□ 2.5
SBNO1A3KN83 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.68■■■□□ 2.5
SBNO1A3KN83 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SBNO1A3KN83 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
SBNO1A3KN83 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SBNO1A3KN83 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 EMC9-206ENST00000560403 872 ntTSL 2 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SBNO1A3KN83 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
SBNO1A3KN83 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SBNO1A3KN83 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
SBNO1A3KN83 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
SBNO1A3KN83 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.67■■■□□ 2.5
SBNO1A3KN83 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SBNO1A3KN83 CDCA4P2-201ENST00000441182 718 ntBASIC30.66■■■□□ 2.5
SBNO1A3KN83 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.66■■■□□ 2.5
SBNO1A3KN83 AC073111.5-205ENST00000641717 521 ntBASIC30.66■■■□□ 2.5
SBNO1A3KN83 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.66■■■□□ 2.5
SBNO1A3KN83 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SBNO1A3KN83 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.66■■■□□ 2.5
SBNO1A3KN83 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.66■■■□□ 2.5
SBNO1A3KN83 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.65■■■□□ 2.5
SBNO1A3KN83 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SBNO1A3KN83 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SBNO1A3KN83 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC30.65■■■□□ 2.5
SBNO1A3KN83 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SBNO1A3KN83 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.65■■■□□ 2.5
SBNO1A3KN83 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.65■■■□□ 2.5
SBNO1A3KN83 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.65■■■□□ 2.5
SBNO1A3KN83 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SBNO1A3KN83 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SBNO1A3KN83 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SBNO1A3KN83 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
SBNO1A3KN83 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SBNO1A3KN83 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
SBNO1A3KN83 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.64■■■□□ 2.5
SBNO1A3KN83 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SBNO1A3KN83 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SBNO1A3KN83 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC30.64■■■□□ 2.5
SBNO1A3KN83 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
SBNO1A3KN83 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SBNO1A3KN83 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SBNO1A3KN83 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SBNO1A3KN83 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.63■■■□□ 2.49
SBNO1A3KN83 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.63■■■□□ 2.49
SBNO1A3KN83 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SBNO1A3KN83 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SBNO1A3KN83 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SBNO1A3KN83 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SBNO1A3KN83 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
SBNO1A3KN83 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.62■■■□□ 2.49
SBNO1A3KN83 AC105233.4-201ENST00000642045 216 ntBASIC30.62■■■□□ 2.49
SBNO1A3KN83 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SBNO1A3KN83 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SBNO1A3KN83 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.61■■■□□ 2.49
SBNO1A3KN83 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
SBNO1A3KN83 TPRG1LP1-201ENST00000598702 760 ntBASIC30.61■■■□□ 2.49
SBNO1A3KN83 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SBNO1A3KN83 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SBNO1A3KN83 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.61■■■□□ 2.49
SBNO1A3KN83 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
SBNO1A3KN83 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SBNO1A3KN83 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SBNO1A3KN83 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SBNO1A3KN83 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.6■■■□□ 2.49
SBNO1A3KN83 GXYLT1P5-201ENST00000614548 1189 ntBASIC30.6■■■□□ 2.49
SBNO1A3KN83 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.6■■■□□ 2.49
SBNO1A3KN83 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SBNO1A3KN83 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SBNO1A3KN83 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SBNO1A3KN83 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.59■■■□□ 2.49
SBNO1A3KN83 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SBNO1A3KN83 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.59■■■□□ 2.49
SBNO1A3KN83 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
SBNO1A3KN83 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SBNO1A3KN83 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SBNO1A3KN83 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.58■■■□□ 2.49
SBNO1A3KN83 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SBNO1A3KN83 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.58■■■□□ 2.49
SBNO1A3KN83 DUX4L4-201ENST00000566884 1269 ntBASIC30.58■■■□□ 2.49
SBNO1A3KN83 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.58■■■□□ 2.49
SBNO1A3KN83 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SBNO1A3KN83 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SBNO1A3KN83 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.57■■■□□ 2.48
SBNO1A3KN83 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SBNO1A3KN83 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.57■■■□□ 2.48
SBNO1A3KN83 AC104771.1-201ENST00000603335 964 ntBASIC30.57■■■□□ 2.48
SBNO1A3KN83 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.57■■■□□ 2.48
SBNO1A3KN83 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SBNO1A3KN83 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SBNO1A3KN83 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms