Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
DUXBA0A1W2PPF3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DUXBA0A1W2PPF3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.21■□□□□ 0.51
DUXBA0A1W2PPF3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUXBA0A1W2PPF3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUXBA0A1W2PPF3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUXBA0A1W2PPF3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DUXBA0A1W2PPF3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.21■□□□□ 0.5
DUXBA0A1W2PPF3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DUXBA0A1W2PPF3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 GPX1-201ENST00000419349 1106 ntBASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 MIR6765-201ENST00000614092 87 ntBASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DUXBA0A1W2PPF3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 AL353803.4-201ENST00000565882 1934 ntBASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 LONRF2P2-201ENST00000439212 571 ntBASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DUXBA0A1W2PPF3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 AL024507.2-201ENST00000606070 2574 ntBASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.17■□□□□ 0.5
DUXBA0A1W2PPF3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUXBA0A1W2PPF3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 SPCS2P3-201ENST00000500401 656 ntBASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 MIR7108-201ENST00000614319 87 ntBASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms