Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AC025884.2-201ENST00000553429 711 ntBASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV12-1A0A0B4J245 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 AC079630.1-202ENST00000618127 1840 ntBASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 AC092667.1-201ENST00000434301 2586 ntBASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV12-1A0A0B4J245 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV12-1A0A0B4J245 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
TRAV12-1A0A0B4J245 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRAV12-1A0A0B4J245 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV12-1A0A0B4J245 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 FAM99A-202ENST00000538190 1989 ntBASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 AC080038.3-201ENST00000623346 1952 ntBASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV12-1A0A0B4J245 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV12-1A0A0B4J245 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV12-1A0A0B4J245 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms