Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 ALDH1A3-203ENST00000557963 1670 ntBASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-1A0A0B4J241 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 AC138932.1-201ENST00000534164 6830 ntBASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 DUX4L9-201ENST00000449051 1259 ntBASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-1A0A0B4J241 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV13-1A0A0B4J241 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 LINC00526-201ENST00000581067 1875 ntBASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV13-1A0A0B4J241 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV13-1A0A0B4J241 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV13-1A0A0B4J241 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV13-1A0A0B4J241 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV13-1A0A0B4J241 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 LONRF2P2-201ENST00000439212 571 ntBASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 AC011551.1-201ENST00000614101 683 ntBASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms