Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV26-1A0A087WT03 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV26-1A0A087WT03 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV26-1A0A087WT03 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 AL356740.2-201ENST00000601559 647 ntBASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV26-1A0A087WT03 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV26-1A0A087WT03 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 AL117332.1-201ENST00000622628 974 ntBASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV26-1A0A087WT03 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms