Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV20-1A0A075B6N2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV20-1A0A075B6N2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV20-1A0A075B6N2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV20-1A0A075B6N2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV20-1A0A075B6N2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV20-1A0A075B6N2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV20-1A0A075B6N2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV20-1A0A075B6N2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV20-1A0A075B6N2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 HLA-L-211ENST00000482052 1765 ntBASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV20-1A0A075B6N2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 AL133380.1-201ENST00000506013 324 ntBASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV20-1A0A075B6N2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TRBV20-1A0A075B6N2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms