Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 PFN1P12-201ENST00000455938 534 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AL583810.1-201ENST00000553344 1045 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC243960.2-201ENST00000600996 747 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AL356740.1-201ENST00000602192 1297 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC079336.7-201ENST00000623428 1078 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC015967.2-201ENST00000624092 234 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AC006435.4-201ENST00000625037 234 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AL356737.1-201ENST00000634391 234 ntBASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 MCU-204ENST00000536019 3224 ntTSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CHAMP1Q96JM3 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 RNA5SP359-201ENST00000364838 113 ntBASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 MTX1P1-201ENST00000440904 838 ntBASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 ALG1L13P-202ENST00000519320 584 ntBASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AL021707.6-201ENST00000609212 491 ntBASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AC090164.2-201ENST00000611487 516 ntBASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHAMP1Q96JM3 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHAMP1Q96JM3 CTAGE13P-201ENST00000416709 2446 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms