Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 KRT8P29-201ENST00000420409 1371 ntBASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 BOLA2P3-201ENST00000404566 256 ntBASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 OR8T1P-201ENST00000421347 918 ntBASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC234783.1-201ENST00000441761 496 ntBASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AL512343.1-201ENST00000605837 169 ntBASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 AC008764.8-201ENST00000623966 2717 ntBASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
BBS1Q8NFJ9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 AOC4P-203ENST00000566825 2289 ntBASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 RCC2P5-201ENST00000492126 1487 ntBASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms