Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AC093462.1-201ENST00000621167 1683 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 TSPY25P-201ENST00000429463 745 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AC104073.2-201ENST00000453737 312 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 BNIP3P42-201ENST00000454982 569 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 RNA5SP412-201ENST00000516234 123 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 BNIP3P29-201ENST00000598302 571 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AC011447.5-201ENST00000616168 564 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AC022748.3-201ENST00000621828 275 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 AC068587.8-201ENST00000641239 219 ntBASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC50Q8IVM0 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 MAPK10-262ENST00000641051 5738 ntBASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 GOLGA2P4-201ENST00000441462 777 ntBASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 IGHV3-71-201ENST00000523324 359 ntBASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 AC104982.3-201ENST00000581995 514 ntBASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 AL157813.1-201ENST00000612996 587 ntBASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC50Q8IVM0 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms