Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC114812.4-201ENST00000506676 757 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 ELOBP2-201ENST00000526184 355 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 FP325317.1-201ENST00000539936 1042 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 HNRNPA1P11-201ENST00000580106 956 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC126755.1-201ENST00000525846 6405 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 AC005912.2-201ENST00000619492 2400 ntBASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RSPO4Q2I0M5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 MGST3-204ENST00000367888 778 ntTSL 3 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AC253536.5-201ENST00000506097 347 ntBASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AC131274.3-201ENST00000578745 1271 ntBASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AC090616.6-202ENST00000583601 1088 ntBASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AC015818.3-201ENST00000583797 589 ntBASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AL121992.3-201ENST00000606186 346 ntBASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RSPO4Q2I0M5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms