Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AL445250.1-201ENST00000641671 2259 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.62□□□□□ -0.71
RAB4AP20338 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.62□□□□□ -0.71
RAB4AP20338 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.62□□□□□ -0.71
RAB4AP20338 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.62□□□□□ -0.71
RAB4AP20338 ALG1L5P-201ENST00000482043 771 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
RAB4AP20338 AC138761.1-201ENST00000584393 385 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 MTDHP5-201ENST00000598980 586 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.62□□□□□ -0.71
RAB4AP20338 AL596442.2-201ENST00000610240 980 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 BX539320.1-201ENST00000623759 877 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.62□□□□□ -0.71
RAB4AP20338 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC10.62□□□□□ -0.71
RAB4AP20338 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
RAB4AP20338 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
RAB4AP20338 AC002350.2-201ENST00000623894 1828 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
RAB4AP20338 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 AC037459.3-201ENST00000521025 2750 ntBASIC10.62□□□□□ -0.71
RAB4AP20338 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.62□□□□□ -0.71
RAB4AP20338 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.62□□□□□ -0.71
RAB4AP20338 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC10.62□□□□□ -0.71
RAB4AP20338 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC10.62□□□□□ -0.71
RAB4AP20338 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RAB4AP20338 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.61□□□□□ -0.71
RAB4AP20338 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.61□□□□□ -0.71
RAB4AP20338 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.61□□□□□ -0.71
RAB4AP20338 AC092337.1-201ENST00000568699 1129 ntBASIC10.61□□□□□ -0.71
RAB4AP20338 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.61□□□□□ -0.71
RAB4AP20338 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 BAP1-211ENST00000615113 489 ntBASIC10.61□□□□□ -0.71
RAB4AP20338 AP001059.3-201ENST00000619053 235 ntBASIC10.61□□□□□ -0.71
RAB4AP20338 AC009093.7-201ENST00000623853 1223 ntBASIC10.61□□□□□ -0.71
RAB4AP20338 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB4AP20338 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
RAB4AP20338 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB4AP20338 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms