Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
PKHD1P08F94 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC8.38□□□□□ -1.07
PKHD1P08F94 KLK8-201ENST00000291726 853 ntTSL 5 BASIC8.38□□□□□ -1.07
PKHD1P08F94 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 AC009237.11-201ENST00000425635 265 ntBASIC8.38□□□□□ -1.07
PKHD1P08F94 CDCA4P3-201ENST00000442572 689 ntBASIC8.38□□□□□ -1.07
PKHD1P08F94 COQ5-202ENST00000445328 992 ntTSL 2 BASIC8.38□□□□□ -1.07
PKHD1P08F94 AC018892.1-201ENST00000451098 265 ntBASIC8.38□□□□□ -1.07
PKHD1P08F94 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC8.38□□□□□ -1.07
PKHD1P08F94 OR5BA1P-201ENST00000529722 982 ntBASIC8.38□□□□□ -1.07
PKHD1P08F94 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC8.38□□□□□ -1.07
PKHD1P08F94 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC8.38□□□□□ -1.07
PKHD1P08F94 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC8.38□□□□□ -1.07
PKHD1P08F94 AC022392.1-201ENST00000609403 744 ntBASIC8.38□□□□□ -1.07
PKHD1P08F94 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PKHD1P08F94 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
PKHD1P08F94 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PKHD1P08F94 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 MARK2P9-201ENST00000430958 1727 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 S100A1-203ENST00000368698 784 ntTSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 SNRPCP5-201ENST00000531775 189 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC015656.1-201ENST00000624209 3578 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PKHD1P08F94 PGAM1P2-201ENST00000436071 725 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 Z93242.2-201ENST00000445666 394 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AP001107.8-201ENST00000530805 479 ntTSL 3 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AP005121.2-201ENST00000583306 1101 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AD000091.1-201ENST00000592379 287 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AC092471.2-201ENST00000637219 651 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AL513478.3-201ENST00000641038 1095 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AC089987.1-202ENST00000641959 426 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 TCAF1P1-201ENST00000414990 2232 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC8.37□□□□□ -1.07
PKHD1P08F94 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC008038.1-201ENST00000634247 1314 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 THUMPD1P1-201ENST00000400014 1041 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 RPSAP46-201ENST00000428316 882 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 KRT18P63-201ENST00000505463 979 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AC136475.6-201ENST00000533113 289 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC016397.2-201ENST00000624848 1985 ntBASIC8.37□□□□□ -1.07
PKHD1P08F94 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PKHD1P08F94 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PKHD1P08F94 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PKHD1P08F94 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PKHD1P08F94 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PKHD1P08F94 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PKHD1P08F94 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC8.36□□□□□ -1.07
PKHD1P08F94 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PKHD1P08F94 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PKHD1P08F94 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC8.36□□□□□ -1.07
PKHD1P08F94 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PKHD1P08F94 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms