Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CNN2P8-201ENST00000421872 913 ntBASIC15.52■□□□□ 0.08
TPM3P06753 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.52■□□□□ 0.08
TPM3P06753 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TPM3P06753 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM3P06753 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM3P06753 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.52■□□□□ 0.08
TPM3P06753 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TPM3P06753 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM3P06753 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.52■□□□□ 0.08
TPM3P06753 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.52■□□□□ 0.08
TPM3P06753 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.52■□□□□ 0.08
TPM3P06753 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM3P06753 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.52■□□□□ 0.08
TPM3P06753 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC15.52■□□□□ 0.07
TPM3P06753 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC15.52■□□□□ 0.07
TPM3P06753 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPM3P06753 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC15.52■□□□□ 0.07
TPM3P06753 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TPM3P06753 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPM3P06753 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TPM3P06753 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPM3P06753 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TPM3P06753 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM3P06753 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM3P06753 LINC00115-201ENST00000473798 1317 ntBASIC15.51■□□□□ 0.07
TPM3P06753 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TPM3P06753 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM3P06753 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM3P06753 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.51■□□□□ 0.07
TPM3P06753 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM3P06753 AC002472.2-201ENST00000442739 958 ntBASIC15.51■□□□□ 0.07
TPM3P06753 AC012441.2-201ENST00000444843 739 ntBASIC15.51■□□□□ 0.07
TPM3P06753 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM3P06753 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.51■□□□□ 0.07
TPM3P06753 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 SLC25A47P1-201ENST00000531577 414 ntBASIC15.51■□□□□ 0.07
TPM3P06753 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM3P06753 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.51■□□□□ 0.07
TPM3P06753 AC133540.1-201ENST00000620845 1019 ntBASIC15.51■□□□□ 0.07
TPM3P06753 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM3P06753 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM3P06753 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TPM3P06753 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM3P06753 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM3P06753 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 AC011700.1-201ENST00000610409 2627 ntBASIC15.5■□□□□ 0.07
TPM3P06753 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TPM3P06753 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM3P06753 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TPM3P06753 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM3P06753 HIST2H2BB-201ENST00000449108 381 ntBASIC15.5■□□□□ 0.07
TPM3P06753 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.5■□□□□ 0.07
TPM3P06753 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.5■□□□□ 0.07
TPM3P06753 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.5■□□□□ 0.07
TPM3P06753 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM3P06753 FTH1P14-201ENST00000482930 551 ntBASIC15.5■□□□□ 0.07
TPM3P06753 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.5■□□□□ 0.07
TPM3P06753 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPM3P06753 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms