Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 AL450487.1-201ENST00000426799 995 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.93□□□□□ -0.66
IFNA1P01562 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.93□□□□□ -0.66
IFNA1P01562 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.93□□□□□ -0.66
IFNA1P01562 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.93□□□□□ -0.66
IFNA1P01562 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 BRI3BPP1-201ENST00000594224 787 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 TECR-220ENST00000600083 1204 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.93□□□□□ -0.66
IFNA1P01562 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.93□□□□□ -0.66
IFNA1P01562 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 BTBD7P1-201ENST00000447253 1453 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 AP000593.2-201ENST00000542775 1433 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 AC010536.1-201ENST00000538868 2611 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 DDO-201ENST00000368923 1953 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 AL139158.3-201ENST00000641212 1562 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC10.92□□□□□ -0.66
IFNA1P01562 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
IFNA1P01562 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 RN7SKP175-201ENST00000408472 289 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 SOCS2P1-201ENST00000417727 557 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.92□□□□□ -0.66
IFNA1P01562 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 AC093433.1-201ENST00000458048 571 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 AC009078.2-202ENST00000463353 338 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.92□□□□□ -0.66
IFNA1P01562 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC10.92□□□□□ -0.66
IFNA1P01562 AP000344.2-201ENST00000512987 629 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
IFNA1P01562 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.92□□□□□ -0.66
IFNA1P01562 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.92□□□□□ -0.66
IFNA1P01562 MTDHP5-201ENST00000598980 586 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 AC027601.3-201ENST00000622907 509 ntBASIC10.92□□□□□ -0.66
IFNA1P01562 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
IFNA1P01562 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms