Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRAV33-201ENST00000557514 338 ntBASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 AC126773.3-201ENST00000562089 893 ntBASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 MIR4686-201ENST00000584128 76 ntBASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 GPSM3-210ENST00000619085 1177 ntTSL 5 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 UROD-222ENST00000636836 1173 ntTSL 5 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 C16orf46-202ENST00000378611 1857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RIMBP3Q9UFD9 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 DOC2GP-204ENST00000639052 2548 ntBASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 GALM-202ENST00000410063 1023 ntTSL 3 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 SDR42E1P5-201ENST00000430344 866 ntBASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 METTL23-213ENST00000591571 585 ntTSL 3 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 AL139823.1-201ENST00000641871 1225 ntBASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RIMBP3Q9UFD9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 KRT18P39-201ENST00000415349 1299 ntBASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 RRM2P2-201ENST00000436212 652 ntBASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 MIR4418-201ENST00000581169 62 ntBASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AC239859.4-201ENST00000582255 675 ntBASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 RN7SL491P-201ENST00000584748 269 ntBASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 pRNA.10-201ENST00000613590 89 ntBASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AC072062.1-201ENST00000617699 351 ntTSL 5 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AC091941.1-201ENST00000623003 576 ntBASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 LINC00694-202ENST00000634610 769 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 LINC01219-201ENST00000418612 722 ntTSL 2 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 ADCY10-203ENST00000476818 703 ntTSL 3 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AC023794.3-201ENST00000514503 564 ntTSL 3 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AC007540.1-201ENST00000548473 507 ntTSL 3 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AC010761.4-201ENST00000577325 521 ntTSL 3 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIMBP3Q9UFD9 AL138762.1-201ENST00000608554 1637 ntBASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 TUBA1A-207ENST00000550767 1384 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC027612.1-201ENST00000445234 2395 ntBASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 SAMMSON-221ENST00000641715 1546 ntBASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 REG1B-201ENST00000305089 767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 OR4A5-201ENST00000319760 1071 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AL590705.1-202ENST00000366109 578 ntTSL 3 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC005102.1-201ENST00000403118 479 ntBASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 LATS2-AS1-201ENST00000422510 632 ntTSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC097066.1-201ENST00000456878 683 ntTSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 TRAPPC2L-202ENST00000561840 558 ntTSL 5 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 RN7SL488P-201ENST00000585186 286 ntBASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 AC027348.1-201ENST00000615979 615 ntBASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 MIR6776-201ENST00000616678 59 ntBASIC20.52■□□□□ 0.88
RIMBP3Q9UFD9 GGNBP1-206ENST00000618642 897 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms