Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 PHBP10-201ENST00000416467 784 ntBASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 KRT19P4-201ENST00000443208 943 ntBASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 AC023906.1-201ENST00000486386 453 ntBASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 BCL2L12P1-201ENST00000508390 733 ntBASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 KRT8P25-201ENST00000473150 1456 ntBASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DNMT3BQ9UBC3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AL137244.1-201ENST00000422931 865 ntBASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 RPL18AP16-201ENST00000424057 531 ntBASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AC015818.1-201ENST00000451011 244 ntBASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 SRPK2P-201ENST00000523408 1100 ntBASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 PRMT1P1-201ENST00000604252 1009 ntBASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AL591424.3-201ENST00000614278 872 ntBASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
DNMT3BQ9UBC3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DNMT3BQ9UBC3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms