Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC145285.5-201ENST00000562217 361 ntBASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AL391001.1-201ENST00000602747 715 ntBASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AL031673.1-201ENST00000611460 466 ntBASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC092723.2-201ENST00000624955 793 ntBASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC105206.1-202ENST00000314927 2368 ntBASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 LINC00638-201ENST00000555578 2518 ntBASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 AC025183.3-201ENST00000623526 1482 ntBASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 LINC00265-2P-201ENST00000413372 782 ntBASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 AL158211.2-201ENST00000607282 395 ntBASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 AL161773.1-201ENST00000624845 863 ntBASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
CUEDC1Q9NWM3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms