Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.19□□□□□ -0.46
AP3S1Q92572 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
AP3S1Q92572 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
AP3S1Q92572 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.19□□□□□ -0.46
AP3S1Q92572 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 CD8B2-202ENST00000417670 633 ntBASIC12.19□□□□□ -0.46
AP3S1Q92572 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.19□□□□□ -0.46
AP3S1Q92572 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.19□□□□□ -0.46
AP3S1Q92572 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.19□□□□□ -0.46
AP3S1Q92572 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 AL139424.3-202ENST00000641619 917 ntBASIC12.19□□□□□ -0.46
AP3S1Q92572 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
AP3S1Q92572 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
AP3S1Q92572 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.19□□□□□ -0.46
AP3S1Q92572 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 AC026992.2-203ENST00000563004 2419 ntBASIC12.19□□□□□ -0.46
AP3S1Q92572 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 AL162615.1-201ENST00000429893 1653 ntBASIC12.19□□□□□ -0.46
AP3S1Q92572 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
AP3S1Q92572 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S1Q92572 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 TMBIM7P-202ENST00000641474 1516 ntBASIC12.18□□□□□ -0.46
AP3S1Q92572 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S1Q92572 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 AC073335.2-201ENST00000610177 3441 ntBASIC12.18□□□□□ -0.46
AP3S1Q92572 AC104590.1-202ENST00000558368 1921 ntBASIC12.18□□□□□ -0.46
AP3S1Q92572 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S1Q92572 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S1Q92572 AC097493.3-201ENST00000509725 367 ntBASIC12.18□□□□□ -0.46
AP3S1Q92572 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.18□□□□□ -0.46
AP3S1Q92572 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.18□□□□□ -0.46
AP3S1Q92572 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.18□□□□□ -0.46
AP3S1Q92572 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 AC099568.2-201ENST00000609194 695 ntBASIC12.18□□□□□ -0.46
AP3S1Q92572 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.18□□□□□ -0.46
AP3S1Q92572 RPL13AP3-202ENST00000494676 1473 ntBASIC12.18□□□□□ -0.46
AP3S1Q92572 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
AP3S1Q92572 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.18□□□□□ -0.46
AP3S1Q92572 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
AP3S1Q92572 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
AP3S1Q92572 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
AP3S1Q92572 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S1Q92572 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S1Q92572 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S1Q92572 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S1Q92572 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S1Q92572 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
AP3S1Q92572 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC12.17□□□□□ -0.46
AP3S1Q92572 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms