Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 AC010202.1-201ENST00000551181 405 ntBASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 MEP1AP1-201ENST00000636082 1097 ntBASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 AL513497.1-201ENST00000624273 2083 ntBASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 FAM45BP-202ENST00000592932 1624 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 AC010086.2-201ENST00000428616 226 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 SNORA47-201ENST00000458862 138 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 DPY19L2P4-201ENST00000479881 442 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 AC092612.1-201ENST00000514501 998 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 MIR2278-201ENST00000516344 96 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 AC048382.6-201ENST00000621980 1223 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 FAM90A12P-201ENST00000519497 2375 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 FAM90A24P-201ENST00000520792 2369 ntBASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHROOM1Q2M3G4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 AC012358.2-201ENST00000430010 1434 ntBASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 BEND3P1-201ENST00000421591 1944 ntBASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHROOM1Q2M3G4 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms