Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.05□□□□□ -0.32
RAE1P78406 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.05□□□□□ -0.32
RAE1P78406 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.05□□□□□ -0.32
RAE1P78406 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.05□□□□□ -0.32
RAE1P78406 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 PYY2-201ENST00000315776 282 ntBASIC13.05□□□□□ -0.32
RAE1P78406 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.05□□□□□ -0.32
RAE1P78406 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.05□□□□□ -0.32
RAE1P78406 AC132812.1-201ENST00000583145 892 ntBASIC13.05□□□□□ -0.32
RAE1P78406 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.05□□□□□ -0.32
RAE1P78406 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
RAE1P78406 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.05□□□□□ -0.32
RAE1P78406 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 AC012044.1-201ENST00000603431 297 ntBASIC13.05□□□□□ -0.32
RAE1P78406 AC012073.1-201ENST00000606114 1108 ntBASIC13.05□□□□□ -0.32
RAE1P78406 MIR6799-201ENST00000620297 69 ntBASIC13.05□□□□□ -0.32
RAE1P78406 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.05□□□□□ -0.32
RAE1P78406 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.05□□□□□ -0.32
RAE1P78406 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
RAE1P78406 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RAE1P78406 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
RAE1P78406 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAE1P78406 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
RAE1P78406 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.04□□□□□ -0.32
RAE1P78406 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RAE1P78406 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RAE1P78406 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.04□□□□□ -0.32
RAE1P78406 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 POM121L4P-202ENST00000427789 1891 ntBASIC13.04□□□□□ -0.32
RAE1P78406 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RAE1P78406 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
RAE1P78406 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.04□□□□□ -0.32
RAE1P78406 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.04□□□□□ -0.32
RAE1P78406 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.04□□□□□ -0.32
RAE1P78406 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.04□□□□□ -0.32
RAE1P78406 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 MIR6787-201ENST00000616675 61 ntBASIC13.04□□□□□ -0.32
RAE1P78406 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RAE1P78406 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAE1P78406 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
RAE1P78406 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC13.03□□□□□ -0.32
RAE1P78406 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAE1P78406 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.03□□□□□ -0.32
RAE1P78406 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAE1P78406 AC022364.1-202ENST00000617468 2409 ntBASIC13.03□□□□□ -0.32
RAE1P78406 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAE1P78406 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms