Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 WASH2P-201ENST00000453662 1684 ntBASIC10.29□□□□□ -0.76
HIST1H2BCP62807 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 FAM13C-201ENST00000422313 1963 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 PUDPP3-201ENST00000445368 636 ntBASIC10.29□□□□□ -0.76
HIST1H2BCP62807 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 AL512310.5-201ENST00000551999 515 ntBASIC10.29□□□□□ -0.76
HIST1H2BCP62807 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 AL135744.1-201ENST00000565098 629 ntBASIC10.29□□□□□ -0.76
HIST1H2BCP62807 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 FAM71F1-201ENST00000315184 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 MPP2-203ENST00000461854 3462 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 GP1BA-201ENST00000329125 2501 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
HIST1H2BCP62807 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 FBXO25-201ENST00000276326 2104 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 RTEL1P1-201ENST00000504490 3685 ntBASIC10.28□□□□□ -0.76
HIST1H2BCP62807 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 ALOX15P2-201ENST00000340858 1897 ntBASIC10.28□□□□□ -0.76
HIST1H2BCP62807 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 CRYGEP-201ENST00000412192 528 ntBASIC10.28□□□□□ -0.76
HIST1H2BCP62807 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 AL161773.1-201ENST00000624845 863 ntBASIC10.28□□□□□ -0.76
HIST1H2BCP62807 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HIST1H2BCP62807 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms