Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL354861.3-201ENST00000600140 2412 ntBASIC16.22■□□□□ 0.19
MRE11P49959 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MRE11P49959 RN7SKP230-201ENST00000365642 335 ntBASIC16.22■□□□□ 0.19
MRE11P49959 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.22■□□□□ 0.19
MRE11P49959 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.22■□□□□ 0.19
MRE11P49959 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.22■□□□□ 0.19
MRE11P49959 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.22■□□□□ 0.19
MRE11P49959 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
MRE11P49959 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.22■□□□□ 0.19
MRE11P49959 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MRE11P49959 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC16.22■□□□□ 0.19
MRE11P49959 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.22■□□□□ 0.19
MRE11P49959 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MRE11P49959 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 AC061965.1-201ENST00000560524 1465 ntBASIC16.22■□□□□ 0.19
MRE11P49959 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC16.22■□□□□ 0.19
MRE11P49959 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC16.22■□□□□ 0.19
MRE11P49959 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRE11P49959 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC16.22■□□□□ 0.19
MRE11P49959 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.22■□□□□ 0.19
MRE11P49959 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC16.22■□□□□ 0.19
MRE11P49959 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.21■□□□□ 0.19
MRE11P49959 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
MRE11P49959 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MRE11P49959 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC16.21■□□□□ 0.19
MRE11P49959 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MRE11P49959 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.21■□□□□ 0.19
MRE11P49959 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MRE11P49959 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 SNORA50C-201ENST00000408535 133 ntBASIC16.21■□□□□ 0.19
MRE11P49959 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.21■□□□□ 0.19
MRE11P49959 RPL13AP19-201ENST00000434320 584 ntBASIC16.21■□□□□ 0.19
MRE11P49959 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.21■□□□□ 0.19
MRE11P49959 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.21■□□□□ 0.19
MRE11P49959 AC004898.1-201ENST00000451057 766 ntBASIC16.21■□□□□ 0.19
MRE11P49959 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.21■□□□□ 0.19
MRE11P49959 AC026410.3-201ENST00000514280 936 ntBASIC16.21■□□□□ 0.19
MRE11P49959 IQSEC3P1-201ENST00000538799 536 ntBASIC16.21■□□□□ 0.19
MRE11P49959 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.21■□□□□ 0.19
MRE11P49959 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 AC097724.1-201ENST00000609581 426 ntBASIC16.21■□□□□ 0.19
MRE11P49959 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.21■□□□□ 0.19
MRE11P49959 SNORA50.1-201ENST00000628590 135 ntBASIC16.21■□□□□ 0.19
MRE11P49959 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MRE11P49959 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC16.21■□□□□ 0.19
MRE11P49959 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.21■□□□□ 0.19
MRE11P49959 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MRE11P49959 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRE11P49959 AC092053.3-201ENST00000641308 4975 ntBASIC16.21■□□□□ 0.19
MRE11P49959 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC16.21■□□□□ 0.18
MRE11P49959 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRE11P49959 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
MRE11P49959 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MRE11P49959 ZNF493-208ENST00000599461 1769 ntBASIC16.21■□□□□ 0.18
MRE11P49959 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC16.2■□□□□ 0.18
MRE11P49959 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MRE11P49959 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC16.2■□□□□ 0.18
MRE11P49959 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRE11P49959 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms