Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.68□□□□□ -0.22
SOX11P35716 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SOX11P35716 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.68□□□□□ -0.22
SOX11P35716 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC13.67□□□□□ -0.22
SOX11P35716 AC064801.2-201ENST00000625052 1303 ntBASIC13.67□□□□□ -0.22
SOX11P35716 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SOX11P35716 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SOX11P35716 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.67□□□□□ -0.22
SOX11P35716 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 AC092117.1-201ENST00000621230 3250 ntBASIC13.67□□□□□ -0.22
SOX11P35716 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.67□□□□□ -0.22
SOX11P35716 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.67□□□□□ -0.22
SOX11P35716 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.67□□□□□ -0.22
SOX11P35716 RPS20P25-201ENST00000412447 352 ntBASIC13.67□□□□□ -0.22
SOX11P35716 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.67□□□□□ -0.22
SOX11P35716 AC012441.2-201ENST00000444843 739 ntBASIC13.67□□□□□ -0.22
SOX11P35716 KLF2P1-201ENST00000447438 1042 ntBASIC13.67□□□□□ -0.22
SOX11P35716 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.67□□□□□ -0.22
SOX11P35716 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.67□□□□□ -0.22
SOX11P35716 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.67□□□□□ -0.22
SOX11P35716 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.67□□□□□ -0.22
SOX11P35716 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.67□□□□□ -0.22
SOX11P35716 HMGB1P8-201ENST00000558211 949 ntBASIC13.67□□□□□ -0.22
SOX11P35716 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.67□□□□□ -0.22
SOX11P35716 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.67□□□□□ -0.22
SOX11P35716 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 AC097724.1-201ENST00000609581 426 ntBASIC13.67□□□□□ -0.22
SOX11P35716 BX088702.1-201ENST00000610784 235 ntBASIC13.67□□□□□ -0.22
SOX11P35716 CU633904.3-201ENST00000624042 1029 ntBASIC13.67□□□□□ -0.22
SOX11P35716 AL805961.1-203ENST00000641078 1258 ntBASIC13.67□□□□□ -0.22
SOX11P35716 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SOX11P35716 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SOX11P35716 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SOX11P35716 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SOX11P35716 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.67□□□□□ -0.22
SOX11P35716 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.67□□□□□ -0.22
SOX11P35716 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.67□□□□□ -0.22
SOX11P35716 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.67□□□□□ -0.22
SOX11P35716 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SOX11P35716 PTPRVP-205ENST00000641549 5067 ntBASIC13.66□□□□□ -0.22
SOX11P35716 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.66□□□□□ -0.22
SOX11P35716 CSPG4P11-201ENST00000560634 4910 ntBASIC13.66□□□□□ -0.22
SOX11P35716 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 AC244394.1-201ENST00000435000 1665 ntBASIC13.66□□□□□ -0.22
SOX11P35716 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
SOX11P35716 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.66□□□□□ -0.22
SOX11P35716 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC13.66□□□□□ -0.22
SOX11P35716 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.66□□□□□ -0.22
SOX11P35716 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.66□□□□□ -0.22
SOX11P35716 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.66□□□□□ -0.22
SOX11P35716 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.66□□□□□ -0.22
SOX11P35716 VDAC1P1-201ENST00000439229 848 ntBASIC13.66□□□□□ -0.22
SOX11P35716 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC13.66□□□□□ -0.22
SOX11P35716 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.66□□□□□ -0.22
SOX11P35716 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SOX11P35716 RN7SL769P-201ENST00000469386 295 ntBASIC13.66□□□□□ -0.22
SOX11P35716 RN7SL11P-201ENST00000471305 293 ntBASIC13.66□□□□□ -0.22
SOX11P35716 HLA-J-204ENST00000495278 958 ntBASIC13.66□□□□□ -0.22
SOX11P35716 AC125604.1-201ENST00000496255 707 ntBASIC13.66□□□□□ -0.22
SOX11P35716 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.66□□□□□ -0.22
SOX11P35716 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.66□□□□□ -0.22
SOX11P35716 SNORD3B-2-202ENST00000571722 791 ntBASIC13.66□□□□□ -0.22
SOX11P35716 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SOX11P35716 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.66□□□□□ -0.22
SOX11P35716 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SOX11P35716 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms