Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
APOC1P02654 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 AC145098.2-201ENST00000623593 3026 ntBASIC12.32□□□□□ -0.44
APOC1P02654 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 PCDHB18P-202ENST00000526308 3197 ntBASIC12.32□□□□□ -0.44
APOC1P02654 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC1P02654 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
APOC1P02654 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 GOLGA2P4-201ENST00000441462 777 ntBASIC12.32□□□□□ -0.44
APOC1P02654 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC1P02654 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC1P02654 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.32□□□□□ -0.44
APOC1P02654 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.32□□□□□ -0.44
APOC1P02654 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 LINC01165-201ENST00000445190 1623 ntBASIC12.32□□□□□ -0.44
APOC1P02654 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC1P02654 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 TUBB1P2-201ENST00000422712 1306 ntBASIC12.32□□□□□ -0.44
APOC1P02654 TUBB1P1-201ENST00000503144 1300 ntBASIC12.32□□□□□ -0.44
APOC1P02654 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC1P02654 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC1P02654 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC1P02654 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
APOC1P02654 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 AC068760.1-201ENST00000493579 1953 ntBASIC12.31□□□□□ -0.44
APOC1P02654 AC020917.4-201ENST00000623994 1999 ntBASIC12.31□□□□□ -0.44
APOC1P02654 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC1P02654 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
APOC1P02654 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC1P02654 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
APOC1P02654 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.31□□□□□ -0.44
APOC1P02654 AL591846.1-201ENST00000451736 433 ntBASIC12.31□□□□□ -0.44
APOC1P02654 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC1P02654 RPL13AP20-201ENST00000459725 609 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms