Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ELK1P1-201ENST00000485699 580 ntBASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AC145098.2-201ENST00000623593 3026 ntBASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 IL9RP3-201ENST00000442856 1674 ntBASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AL157407.1-201ENST00000435784 904 ntBASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC140658.4-201ENST00000561990 352 ntBASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC073413.1-201ENST00000603927 732 ntBASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AL591471.1-201ENST00000621855 229 ntBASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms