Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 PGAM1P12-201ENST00000505622 748 ntBASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 CES1P2-201ENST00000566467 1242 ntBASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 AL136982.5-201ENST00000605222 294 ntBASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 HLA-C-210ENST00000640219 976 ntBASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ABCD1P4-201ENST00000399687 604 ntBASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 MIR4472-1-201ENST00000584349 80 ntBASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 AC010976.2-201ENST00000609697 852 ntBASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 AL358781.1-202ENST00000321081 1360 ntBASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 AC108024.1-201ENST00000626286 1721 ntBASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.73■□□□□ 0.27
HMG20BQ9P0W2 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMG20BQ9P0W2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms