Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 AP000358.1-201ENST00000456260 156 ntBASIC12.96□□□□□ -0.33
NUP43Q8NFH3 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 RPL18AP8-201ENST00000486071 528 ntBASIC12.96□□□□□ -0.33
NUP43Q8NFH3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 AC020922.3-201ENST00000595064 547 ntBASIC12.96□□□□□ -0.33
NUP43Q8NFH3 AC007326.1-201ENST00000604539 458 ntBASIC12.96□□□□□ -0.33
NUP43Q8NFH3 AL031673.1-201ENST00000611460 466 ntBASIC12.96□□□□□ -0.33
NUP43Q8NFH3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NUP43Q8NFH3 LINC00567-201ENST00000569854 3409 ntBASIC12.96□□□□□ -0.33
NUP43Q8NFH3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NUP43Q8NFH3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 FAM90A2P-201ENST00000511144 1395 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 FAM90A25P-201ENST00000528404 1395 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 AL583805.1-201ENST00000391389 531 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 MIR1307-201ENST00000408840 149 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 AL807761.2-201ENST00000422849 729 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 CALR4P-201ENST00000431943 946 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 ACTG1P17-201ENST00000558391 1119 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 MIR4754-201ENST00000582477 89 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 AP001505.2-201ENST00000616815 443 ntBASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms