Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 OR7E155P-201ENST00000412208 1014 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 CCND3P1-201ENST00000438347 580 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 RNU1-80P-201ENST00000459500 161 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 AC020904.3-201ENST00000624199 442 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 MME-218ENST00000625667 363 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 KRT8P25-201ENST00000473150 1456 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 PI4KAP2-201ENST00000360806 2080 ntBASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM1Q2M3G4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
SHROOM1Q2M3G4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SHROOM1Q2M3G4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AGAP12P-201ENST00000585227 2359 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AL357373.1-201ENST00000394974 322 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 PSME2P2-201ENST00000453033 700 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 NDUFB2P1-201ENST00000506966 295 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 OR4A49P-201ENST00000527050 632 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 PHBP18-201ENST00000546648 813 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 CCND3P2-201ENST00000579393 537 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 GUCY2EP-203ENST00000531117 1918 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 FAM226B-201ENST00000602508 1490 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 AC020917.4-201ENST00000623994 1999 ntBASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM1Q2M3G4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM1Q2M3G4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms