Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 AC138761.4-202ENST00000577956 2552 ntBASIC14.37□□□□□ -0.11
CBX1P83916 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CBX1P83916 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC14.37□□□□□ -0.11
CBX1P83916 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CBX1P83916 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC14.37□□□□□ -0.11
CBX1P83916 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 AC243964.3-201ENST00000623022 2028 ntBASIC14.36□□□□□ -0.11
CBX1P83916 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CBX1P83916 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 MIR346-201ENST00000362234 95 ntBASIC14.36□□□□□ -0.11
CBX1P83916 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.36□□□□□ -0.11
CBX1P83916 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CBX1P83916 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 AL135744.1-201ENST00000565098 629 ntBASIC14.36□□□□□ -0.11
CBX1P83916 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 AP000842.3-202ENST00000569238 1080 ntBASIC14.36□□□□□ -0.11
CBX1P83916 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 AL773604.1-201ENST00000617417 272 ntBASIC14.36□□□□□ -0.11
CBX1P83916 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 C2-211ENST00000469372 1906 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC14.36□□□□□ -0.11
CBX1P83916 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 AL138725.1-201ENST00000407347 1314 ntBASIC14.36□□□□□ -0.11
CBX1P83916 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CBX1P83916 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CBX1P83916 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CBX1P83916 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CBX1P83916 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 AC005154.3-201ENST00000419639 1393 ntBASIC14.35□□□□□ -0.11
CBX1P83916 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 ANKRD18CP-201ENST00000354752 2980 ntBASIC14.35□□□□□ -0.11
CBX1P83916 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CBX1P83916 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CBX1P83916 AC018521.1-202ENST00000641877 2655 ntBASIC14.35□□□□□ -0.11
CBX1P83916 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 FMO6P-201ENST00000236166 1620 ntBASIC14.35□□□□□ -0.11
CBX1P83916 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.35□□□□□ -0.11
CBX1P83916 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CBX1P83916 AL031284.1-201ENST00000419297 478 ntBASIC14.35□□□□□ -0.11
CBX1P83916 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.35□□□□□ -0.11
CBX1P83916 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms