Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SKP1P63208 MRPL22P1-201ENST00000505398 616 ntBASIC13.17□□□□□ -0.3
SKP1P63208 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 AC093300.1-201ENST00000510368 1201 ntBASIC13.17□□□□□ -0.3
SKP1P63208 RNA5SP423-201ENST00000517127 109 ntBASIC13.17□□□□□ -0.3
SKP1P63208 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 AP002803.1-201ENST00000528836 498 ntBASIC13.17□□□□□ -0.3
SKP1P63208 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.17□□□□□ -0.3
SKP1P63208 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.17□□□□□ -0.3
SKP1P63208 AC079328.1-201ENST00000560358 952 ntBASIC13.17□□□□□ -0.3
SKP1P63208 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 MIR4326-201ENST00000582203 59 ntBASIC13.17□□□□□ -0.3
SKP1P63208 AC140113.1-201ENST00000603467 169 ntBASIC13.17□□□□□ -0.3
SKP1P63208 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.17□□□□□ -0.3
SKP1P63208 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SKP1P63208 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 AC020917.4-201ENST00000623994 1999 ntBASIC13.16□□□□□ -0.3
SKP1P63208 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 AC107918.4-201ENST00000641966 3141 ntBASIC13.16□□□□□ -0.3
SKP1P63208 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 AC106827.1-201ENST00000366454 431 ntBASIC13.16□□□□□ -0.3
SKP1P63208 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.16□□□□□ -0.3
SKP1P63208 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SKP1P63208 ABCD1P4-201ENST00000399687 604 ntBASIC13.16□□□□□ -0.3
SKP1P63208 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 RN7SKP109-201ENST00000410592 316 ntBASIC13.16□□□□□ -0.3
SKP1P63208 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.16□□□□□ -0.3
SKP1P63208 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.16□□□□□ -0.3
SKP1P63208 RPL7P35-201ENST00000446943 740 ntBASIC13.16□□□□□ -0.3
SKP1P63208 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.16□□□□□ -0.3
SKP1P63208 RN7SL564P-201ENST00000496309 250 ntBASIC13.16□□□□□ -0.3
SKP1P63208 PRSS3P1-201ENST00000503996 742 ntBASIC13.16□□□□□ -0.3
SKP1P63208 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.16□□□□□ -0.3
SKP1P63208 AL031673.1-201ENST00000611460 466 ntBASIC13.16□□□□□ -0.3
SKP1P63208 AL805961.1-201ENST00000642026 753 ntBASIC13.16□□□□□ -0.3
SKP1P63208 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 ABCD1P2-201ENST00000429313 1601 ntBASIC13.16□□□□□ -0.3
SKP1P63208 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SKP1P63208 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.16□□□□□ -0.3
SKP1P63208 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SKP1P63208 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SKP1P63208 MARK2P9-201ENST00000430958 1727 ntBASIC13.16□□□□□ -0.3
SKP1P63208 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 FAM95B1-212ENST00000592873 4692 ntBASIC13.16□□□□□ -0.3
SKP1P63208 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SKP1P63208 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SKP1P63208 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.15□□□□□ -0.3
SKP1P63208 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.15□□□□□ -0.3
SKP1P63208 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 AC020763.3-201ENST00000625095 2904 ntBASIC13.15□□□□□ -0.3
SKP1P63208 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SKP1P63208 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.15□□□□□ -0.3
SKP1P63208 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms