Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.34□□□□□ -0.11
ERVFC1P60507 OR4C14P-201ENST00000440929 923 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 AC114812.4-201ENST00000506676 757 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC14.34□□□□□ -0.11
ERVFC1P60507 ABCC6P1-203ENST00000565566 1170 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.34□□□□□ -0.11
ERVFC1P60507 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.34□□□□□ -0.11
ERVFC1P60507 RN7SL162P-201ENST00000579233 292 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 RN7SL478P-201ENST00000584358 298 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 CR392039.2-201ENST00000623182 509 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 AC005865.2-202ENST00000635814 725 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 AC126755.1-201ENST00000525846 6405 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 LINC00552-201ENST00000625151 2579 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 AC026271.1-201ENST00000447794 1348 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 AC008038.1-201ENST00000634247 1314 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.34□□□□□ -0.11
ERVFC1P60507 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.33□□□□□ -0.11
ERVFC1P60507 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERVFC1P60507 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERVFC1P60507 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERVFC1P60507 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERVFC1P60507 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC14.33□□□□□ -0.11
ERVFC1P60507 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.33□□□□□ -0.11
ERVFC1P60507 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERVFC1P60507 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ERVFC1P60507 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.33□□□□□ -0.12
ERVFC1P60507 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ERVFC1P60507 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 ASS1P1-201ENST00000402854 1237 ntBASIC14.33□□□□□ -0.12
ERVFC1P60507 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.33□□□□□ -0.12
ERVFC1P60507 AC006328.1-201ENST00000437571 379 ntBASIC14.33□□□□□ -0.12
ERVFC1P60507 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
ERVFC1P60507 AC010900.1-201ENST00000449849 1296 ntBASIC14.33□□□□□ -0.12
ERVFC1P60507 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 ACTBP9-201ENST00000587663 1099 ntBASIC14.33□□□□□ -0.12
ERVFC1P60507 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ERVFC1P60507 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 AC138627.1-201ENST00000641127 1257 ntBASIC14.33□□□□□ -0.12
ERVFC1P60507 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 AC139749.1-202ENST00000617529 3139 ntBASIC14.33□□□□□ -0.12
ERVFC1P60507 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.33□□□□□ -0.12
ERVFC1P60507 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ERVFC1P60507 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ERVFC1P60507 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.33□□□□□ -0.12
ERVFC1P60507 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.33□□□□□ -0.12
ERVFC1P60507 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERVFC1P60507 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms