Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 AC073862.5-201ENST00000624129 2027 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.5□□□□□ -0.41
APOBEC1P41238 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.5□□□□□ -0.41
APOBEC1P41238 AC022494.1-201ENST00000466044 728 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 AC130709.1-201ENST00000484779 1212 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.5□□□□□ -0.41
APOBEC1P41238 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 KRT8P2-201ENST00000556193 944 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.5□□□□□ -0.41
APOBEC1P41238 HERC2P11-201ENST00000562845 725 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 AC100756.2-201ENST00000569537 736 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 AL133499.1-201ENST00000596207 608 ntBASIC12.5□□□□□ -0.41
APOBEC1P41238 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOBEC1P41238 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.5□□□□□ -0.41
APOBEC1P41238 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOBEC1P41238 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
APOBEC1P41238 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
APOBEC1P41238 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 GUSBP10-201ENST00000417412 665 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 AC136604.1-202ENST00000425471 771 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.49□□□□□ -0.41
APOBEC1P41238 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.49□□□□□ -0.41
APOBEC1P41238 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms