Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.04■□□□□ 0.16
CAPN2P17655 AC006987.1-201ENST00000413610 527 ntBASIC16.04■□□□□ 0.16
CAPN2P17655 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.04■□□□□ 0.16
CAPN2P17655 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CAPN2P17655 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.04■□□□□ 0.16
CAPN2P17655 IGHV1-12-201ENST00000518307 205 ntBASIC16.04■□□□□ 0.16
CAPN2P17655 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.04■□□□□ 0.16
CAPN2P17655 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 AC145285.5-201ENST00000562217 361 ntBASIC16.04■□□□□ 0.16
CAPN2P17655 TYMSP2-201ENST00000589501 424 ntBASIC16.04■□□□□ 0.16
CAPN2P17655 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.04■□□□□ 0.16
CAPN2P17655 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CAPN2P17655 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CAPN2P17655 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CAPN2P17655 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN2P17655 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CAPN2P17655 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 DNM1P41-201ENST00000623634 3350 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 PTGER4P2-201ENST00000328411 252 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 AC023141.7-201ENST00000430646 407 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 KRT18P62-201ENST00000446618 1287 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 GRPEL2P1-201ENST00000453145 339 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 PTGER4P3-201ENST00000458150 252 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.03■□□□□ 0.16
CAPN2P17655 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.03■□□□□ 0.16
CAPN2P17655 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN2P17655 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN2P17655 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CAPN2P17655 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN2P17655 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 AC023090.2-201ENST00000625182 2110 ntBASIC16.03■□□□□ 0.16
CAPN2P17655 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN2P17655 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN2P17655 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN2P17655 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN2P17655 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN2P17655 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN2P17655 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN2P17655 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN2P17655 ACE3P-201ENST00000423435 1973 ntBASIC16.02■□□□□ 0.16
CAPN2P17655 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CAPN2P17655 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CAPN2P17655 DMBT1P1-203ENST00000636837 4628 ntBASIC16.02■□□□□ 0.16
CAPN2P17655 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN2P17655 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN2P17655 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN2P17655 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN2P17655 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN2P17655 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN2P17655 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CAPN2P17655 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms