Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.81□□□□□ -0.36
BMP4P12644 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.81□□□□□ -0.36
BMP4P12644 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.81□□□□□ -0.36
BMP4P12644 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 AC106794.1-201ENST00000506935 792 ntBASIC12.81□□□□□ -0.36
BMP4P12644 AL391280.1-201ENST00000506969 1062 ntBASIC12.81□□□□□ -0.36
BMP4P12644 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.81□□□□□ -0.36
BMP4P12644 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.81□□□□□ -0.36
BMP4P12644 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.81□□□□□ -0.36
BMP4P12644 AL391001.1-201ENST00000602747 715 ntBASIC12.81□□□□□ -0.36
BMP4P12644 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.81□□□□□ -0.36
BMP4P12644 AL096828.3-201ENST00000615354 462 ntBASIC12.81□□□□□ -0.36
BMP4P12644 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 AC145098.2-201ENST00000623593 3026 ntBASIC12.81□□□□□ -0.36
BMP4P12644 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 CLUHP2-201ENST00000426660 1303 ntBASIC12.81□□□□□ -0.36
BMP4P12644 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.81□□□□□ -0.36
BMP4P12644 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 AOC4P-203ENST00000566825 2289 ntBASIC12.81□□□□□ -0.36
BMP4P12644 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BMP4P12644 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.81□□□□□ -0.36
BMP4P12644 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.81□□□□□ -0.36
BMP4P12644 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
BMP4P12644 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
BMP4P12644 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BMP4P12644 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
BMP4P12644 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.8□□□□□ -0.36
BMP4P12644 AP000593.2-201ENST00000542775 1433 ntBASIC12.8□□□□□ -0.36
BMP4P12644 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
BMP4P12644 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.8□□□□□ -0.36
BMP4P12644 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.8□□□□□ -0.36
BMP4P12644 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.8□□□□□ -0.36
BMP4P12644 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.8□□□□□ -0.36
BMP4P12644 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 AC092028.1-202ENST00000641483 3547 ntBASIC12.8□□□□□ -0.36
BMP4P12644 AC092028.1-201ENST00000641781 3540 ntBASIC12.8□□□□□ -0.36
BMP4P12644 AL022313.4-201ENST00000562756 2046 ntBASIC12.8□□□□□ -0.36
BMP4P12644 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BMP4P12644 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
BMP4P12644 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.8□□□□□ -0.36
BMP4P12644 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.8□□□□□ -0.36
BMP4P12644 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.8□□□□□ -0.36
BMP4P12644 KATNBL1P2-201ENST00000433311 835 ntBASIC12.8□□□□□ -0.36
BMP4P12644 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms