Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 INTS4P1-203ENST00000641008 3683 ntBASIC14.44□□□□□ -0.1
RB1P06400 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.44□□□□□ -0.1
RB1P06400 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC14.44□□□□□ -0.1
RB1P06400 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC14.44□□□□□ -0.1
RB1P06400 CDKN2A-AS1-201ENST00000441769 823 ntBASIC14.44□□□□□ -0.1
RB1P06400 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 RN7SL173P-201ENST00000461853 292 ntBASIC14.44□□□□□ -0.1
RB1P06400 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 YBX1P3-201ENST00000468366 909 ntBASIC14.44□□□□□ -0.1
RB1P06400 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
RB1P06400 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC14.44□□□□□ -0.1
RB1P06400 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC14.44□□□□□ -0.1
RB1P06400 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.44□□□□□ -0.1
RB1P06400 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.43□□□□□ -0.1
RB1P06400 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RB1P06400 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
RB1P06400 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.43□□□□□ -0.1
RB1P06400 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RB1P06400 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.43□□□□□ -0.1
RB1P06400 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 RPL18AP15-201ENST00000430258 517 ntBASIC14.43□□□□□ -0.1
RB1P06400 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.43□□□□□ -0.1
RB1P06400 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.43□□□□□ -0.1
RB1P06400 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.43□□□□□ -0.1
RB1P06400 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.43□□□□□ -0.1
RB1P06400 RN7SL478P-201ENST00000584358 298 ntBASIC14.43□□□□□ -0.1
RB1P06400 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC14.43□□□□□ -0.1
RB1P06400 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC14.43□□□□□ -0.1
RB1P06400 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.43□□□□□ -0.1
RB1P06400 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RB1P06400 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RB1P06400 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RB1P06400 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.43□□□□□ -0.1
RB1P06400 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.43□□□□□ -0.1
RB1P06400 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RB1P06400 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RB1P06400 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RB1P06400 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.42□□□□□ -0.1
RB1P06400 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms