Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.96□□□□□ -0.65
IFNA1P01562 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
IFNA1P01562 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
IFNA1P01562 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC10.96□□□□□ -0.65
IFNA1P01562 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC10.96□□□□□ -0.66
IFNA1P01562 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
IFNA1P01562 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
IFNA1P01562 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IFNA1P01562 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
IFNA1P01562 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IFNA1P01562 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC10.96□□□□□ -0.66
IFNA1P01562 AC091181.1-201ENST00000623762 2098 ntBASIC10.96□□□□□ -0.66
IFNA1P01562 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IFNA1P01562 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IFNA1P01562 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IFNA1P01562 ELL2P1-201ENST00000413990 1906 ntBASIC10.96□□□□□ -0.66
IFNA1P01562 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IFNA1P01562 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
IFNA1P01562 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.95□□□□□ -0.66
IFNA1P01562 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.95□□□□□ -0.66
IFNA1P01562 AL139400.1-201ENST00000366220 510 ntBASIC10.95□□□□□ -0.66
IFNA1P01562 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 AC011495.1-201ENST00000498085 584 ntBASIC10.95□□□□□ -0.66
IFNA1P01562 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.95□□□□□ -0.66
IFNA1P01562 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.95□□□□□ -0.66
IFNA1P01562 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.95□□□□□ -0.66
IFNA1P01562 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.95□□□□□ -0.66
IFNA1P01562 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 RPSAP52-203ENST00000622976 1023 ntBASIC10.95□□□□□ -0.66
IFNA1P01562 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 FAM90A17P-201ENST00000533716 1957 ntBASIC10.95□□□□□ -0.66
IFNA1P01562 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IFNA1P01562 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
IFNA1P01562 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
IFNA1P01562 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 AL512791.2-201ENST00000615251 4609 ntBASIC10.94□□□□□ -0.66
IFNA1P01562 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms