Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 DUX4L50-201ENST00000455245 715 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 KRT8P13-201ENST00000463294 1010 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 KRT8P1-201ENST00000557533 1207 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 MIR4538-201ENST00000581377 78 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AC091544.8-201ENST00000619490 361 ntBASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HLA-DRB4X5D2U9 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 NCLP1-201ENST00000445357 1963 ntBASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 PTPRVP-205ENST00000641549 5067 ntBASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 GOLGA2P5-201ENST00000266746 2395 ntBASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 OR2I1P-208ENST00000641137 4948 ntBASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 BAX-205ENST00000391871 687 ntTSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 RPS9P1-201ENST00000419943 583 ntBASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 CMC2-204ENST00000562713 573 ntTSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
HLA-DRB4X5D2U9 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms