Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC002044.2-201ENST00000624910 970 ntBASIC19.9■□□□□ 0.78
SIN3AQ96ST3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 AC090502.4-201ENST00000551714 1386 ntBASIC19.9■□□□□ 0.78
SIN3AQ96ST3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SIN3AQ96ST3 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIN3AQ96ST3 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SIN3AQ96ST3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC19.89■□□□□ 0.78
SIN3AQ96ST3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SIN3AQ96ST3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC19.89■□□□□ 0.78
SIN3AQ96ST3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 RPL7P35-201ENST00000446943 740 ntBASIC19.89■□□□□ 0.77
SIN3AQ96ST3 LYPLA2P1-203ENST00000447689 696 ntBASIC19.89■□□□□ 0.77
SIN3AQ96ST3 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 COX6A1P2-201ENST00000620597 330 ntBASIC19.89■□□□□ 0.77
SIN3AQ96ST3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SIN3AQ96ST3 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 AC008040.5-201ENST00000599781 1781 ntBASIC19.88■□□□□ 0.77
SIN3AQ96ST3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 LINC00567-201ENST00000569854 3409 ntBASIC19.88■□□□□ 0.77
SIN3AQ96ST3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 OR7E115P-201ENST00000382617 1024 ntBASIC19.88■□□□□ 0.77
SIN3AQ96ST3 TUBB2BP1-201ENST00000404155 871 ntBASIC19.88■□□□□ 0.77
SIN3AQ96ST3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SIN3AQ96ST3 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AC099521.3-201ENST00000624251 2938 ntBASIC19.87■□□□□ 0.77
SIN3AQ96ST3 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 CICP8-201ENST00000455800 2813 ntBASIC19.87■□□□□ 0.77
SIN3AQ96ST3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 CICP9-201ENST00000444451 1913 ntBASIC19.87■□□□□ 0.77
SIN3AQ96ST3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIN3AQ96ST3 AL357563.1-201ENST00000404728 395 ntBASIC19.87■□□□□ 0.77
SIN3AQ96ST3 SNORD23-201ENST00000408876 110 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms