Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CCL25-202ENST00000315626 450 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 FTH1P18-201ENST00000412071 549 ntBASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 RPSAP6-201ENST00000417882 882 ntBASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC007679.1-201ENST00000458609 502 ntBASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 YBX1P3-201ENST00000468366 909 ntBASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 MDC1-209ENST00000613547 830 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC004466.2-201ENST00000614749 516 ntBASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD4Q5XG99 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AC011477.7-201ENST00000617163 1440 ntBASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AC136475.7-201ENST00000602949 592 ntBASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AC008622.3-201ENST00000621170 600 ntBASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 AC244097.1-201ENST00000621631 1216 ntBASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms