Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTC1Q2NKJ3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 RPL13AP3-202ENST00000494676 1473 ntBASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 AC019294.4-201ENST00000561777 2905 ntBASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 AC068760.1-201ENST00000493579 1953 ntBASIC14.77□□□□□ -0.04
CTC1Q2NKJ3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 SIRPB3P-201ENST00000340424 1216 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 OR2W2P-201ENST00000406313 909 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 RPL3P2-204ENST00000413027 1203 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 IFNWP2-201ENST00000431203 580 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AC004801.1-201ENST00000549557 360 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 Z82170.1-201ENST00000625081 3192 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AC073548.1-201ENST00000624088 1882 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AC004241.5-201ENST00000623870 2448 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 PCDHA3-202ENST00000532566 4594 ntBASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTC1Q2NKJ3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 KRT8P43-201ENST00000406052 1458 ntBASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 ABCD1P4-201ENST00000399687 604 ntBASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.76□□□□□ -0.05
CTC1Q2NKJ3 AC078814.4-201ENST00000546650 327 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms