Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.19□□□□□ -0.3
SKP1P63208 NRADDP-202ENST00000641269 1585 ntBASIC13.19□□□□□ -0.3
SKP1P63208 PES1P2-201ENST00000449745 1735 ntBASIC13.19□□□□□ -0.3
SKP1P63208 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.19□□□□□ -0.3
SKP1P63208 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SKP1P63208 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 AC019109.1-201ENST00000401725 1874 ntBASIC13.19□□□□□ -0.3
SKP1P63208 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SKP1P63208 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SKP1P63208 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 AC023794.5-201ENST00000564380 2157 ntBASIC13.18□□□□□ -0.3
SKP1P63208 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SKP1P63208 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.18□□□□□ -0.3
SKP1P63208 AC025183.3-201ENST00000623526 1482 ntBASIC13.18□□□□□ -0.3
SKP1P63208 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.18□□□□□ -0.3
SKP1P63208 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SKP1P63208 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SKP1P63208 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
SKP1P63208 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.18□□□□□ -0.3
SKP1P63208 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.18□□□□□ -0.3
SKP1P63208 COX6A1P2-201ENST00000620597 330 ntBASIC13.18□□□□□ -0.3
SKP1P63208 AL161773.1-201ENST00000624845 863 ntBASIC13.18□□□□□ -0.3
SKP1P63208 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 AC011481.3-201ENST00000623895 5594 ntBASIC13.18□□□□□ -0.3
SKP1P63208 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.18□□□□□ -0.3
SKP1P63208 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.18□□□□□ -0.3
SKP1P63208 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SKP1P63208 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SKP1P63208 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SKP1P63208 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.17□□□□□ -0.3
SKP1P63208 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SKP1P63208 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SKP1P63208 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.17□□□□□ -0.3
SKP1P63208 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.17□□□□□ -0.3
SKP1P63208 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SKP1P63208 FGFR3P1-201ENST00000449999 601 ntBASIC13.17□□□□□ -0.3
SKP1P63208 AC079112.1-201ENST00000454972 939 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms