Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.52□□□□□ -0.41
APOBEC1P41238 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.52□□□□□ -0.41
APOBEC1P41238 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 ORAOV1P1-201ENST00000503108 395 ntBASIC12.52□□□□□ -0.41
APOBEC1P41238 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.52□□□□□ -0.41
APOBEC1P41238 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.52□□□□□ -0.41
APOBEC1P41238 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.52□□□□□ -0.41
APOBEC1P41238 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC005632.3-201ENST00000605544 308 ntBASIC12.52□□□□□ -0.41
APOBEC1P41238 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC084346.2-201ENST00000607097 949 ntBASIC12.52□□□□□ -0.41
APOBEC1P41238 AL021578.1-201ENST00000613646 709 ntBASIC12.52□□□□□ -0.41
APOBEC1P41238 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.52□□□□□ -0.41
APOBEC1P41238 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.52□□□□□ -0.41
APOBEC1P41238 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.41
APOBEC1P41238 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.52□□□□□ -0.41
APOBEC1P41238 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
APOBEC1P41238 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
APOBEC1P41238 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.52□□□□□ -0.41
APOBEC1P41238 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
APOBEC1P41238 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
APOBEC1P41238 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOBEC1P41238 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.51□□□□□ -0.41
APOBEC1P41238 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.51□□□□□ -0.41
APOBEC1P41238 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
APOBEC1P41238 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
APOBEC1P41238 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
APOBEC1P41238 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOBEC1P41238 HLA-DMA-203ENST00000395305 777 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.51□□□□□ -0.41
APOBEC1P41238 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.51□□□□□ -0.41
APOBEC1P41238 AC019193.1-201ENST00000506678 823 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
APOBEC1P41238 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
APOBEC1P41238 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.51□□□□□ -0.41
APOBEC1P41238 MIR3907-201ENST00000579424 151 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 AC091769.1-201ENST00000619576 568 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 AC004623.1-201ENST00000624592 2127 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
APOBEC1P41238 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 AL445250.1-201ENST00000641671 2259 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
APOBEC1P41238 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 AL356585.2-201ENST00000625078 2396 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOBEC1P41238 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 AL355102.3-201ENST00000554299 1678 ntBASIC12.51□□□□□ -0.41
APOBEC1P41238 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOBEC1P41238 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOBEC1P41238 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms