Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
COL15A1P39059 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL15A1P39059 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.19■□□□□ 0.34
COL15A1P39059 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 SNORD23-201ENST00000408876 110 ntBASIC17.18■□□□□ 0.34
COL15A1P39059 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 SNRPCP15-201ENST00000424055 192 ntBASIC17.18■□□□□ 0.34
COL15A1P39059 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC17.18■□□□□ 0.34
COL15A1P39059 ERG-211ENST00000453032 1595 ntTSL 2 BASIC17.18■□□□□ 0.34
COL15A1P39059 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC17.18■□□□□ 0.34
COL15A1P39059 PEBP1P3-201ENST00000455475 548 ntBASIC17.18■□□□□ 0.34
COL15A1P39059 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.18■□□□□ 0.34
COL15A1P39059 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC17.18■□□□□ 0.34
COL15A1P39059 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.18■□□□□ 0.34
COL15A1P39059 RN7SL162P-201ENST00000579233 292 ntBASIC17.18■□□□□ 0.34
COL15A1P39059 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
COL15A1P39059 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC17.18■□□□□ 0.34
COL15A1P39059 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.18■□□□□ 0.34
COL15A1P39059 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
COL15A1P39059 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC17.18■□□□□ 0.34
COL15A1P39059 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
COL15A1P39059 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC17.18■□□□□ 0.34
COL15A1P39059 AL359845.1-201ENST00000458202 1648 ntBASIC17.18■□□□□ 0.34
COL15A1P39059 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.18■□□□□ 0.34
COL15A1P39059 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL15A1P39059 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
COL15A1P39059 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
COL15A1P39059 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COL15A1P39059 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC17.17■□□□□ 0.34
COL15A1P39059 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 AL391647.1-201ENST00000395664 511 ntBASIC17.17■□□□□ 0.34
COL15A1P39059 SERF2-204ENST00000402131 586 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.17■□□□□ 0.34
COL15A1P39059 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 LY6E-215ENST00000523847 427 ntTSL 3 BASIC17.17■□□□□ 0.34
COL15A1P39059 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 NAA38-204ENST00000575208 529 ntTSL 3 BASIC17.17■□□□□ 0.34
COL15A1P39059 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC17.17■□□□□ 0.34
COL15A1P39059 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC17.17■□□□□ 0.34
COL15A1P39059 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
COL15A1P39059 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
COL15A1P39059 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 BEND3P1-201ENST00000421591 1944 ntBASIC17.17■□□□□ 0.34
COL15A1P39059 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL15A1P39059 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.16■□□□□ 0.34
COL15A1P39059 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL15A1P39059 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms