Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 RNPC3-202ENST00000524631 2013 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 JMJD7-PLA2G4B-201ENST00000342159 2966 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 DNAJA4-201ENST00000343789 2961 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 AC022364.1-202ENST00000617468 2409 ntBASIC10.66□□□□□ -0.7
RAB4AP20338 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
RAB4AP20338 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.66□□□□□ -0.7
RAB4AP20338 SPDYE7P-202ENST00000420373 878 ntBASIC10.66□□□□□ -0.7
RAB4AP20338 AL450487.1-201ENST00000426799 995 ntBASIC10.66□□□□□ -0.7
RAB4AP20338 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 AC026434.2-201ENST00000506094 1078 ntBASIC10.66□□□□□ -0.7
RAB4AP20338 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.66□□□□□ -0.7
RAB4AP20338 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.66□□□□□ -0.7
RAB4AP20338 PRSS30P-206ENST00000641773 873 ntBASIC10.66□□□□□ -0.7
RAB4AP20338 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 MSNP1-201ENST00000511640 1732 ntBASIC10.66□□□□□ -0.7
RAB4AP20338 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC10.66□□□□□ -0.7
RAB4AP20338 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 C8B-206ENST00000543257 2382 ntTSL 2 BASIC10.66□□□□□ -0.7
RAB4AP20338 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC10.66□□□□□ -0.7
RAB4AP20338 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RAB4AP20338 MPP7-202ENST00000375719 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC10.65□□□□□ -0.7
RAB4AP20338 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 KLF17-201ENST00000372299 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.65□□□□□ -0.7
RAB4AP20338 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC10.65□□□□□ -0.7
RAB4AP20338 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC10.65□□□□□ -0.7
RAB4AP20338 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
RAB4AP20338 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 ELL2P1-201ENST00000413990 1906 ntBASIC10.65□□□□□ -0.7
RAB4AP20338 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC10.65□□□□□ -0.7
RAB4AP20338 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RAB4AP20338 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms