Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC124944.3-201ENST00000607976 1304 ntBASIC18.54■□□□□ 0.56
ATF3P18847 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC18.54■□□□□ 0.56
ATF3P18847 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ATF3P18847 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC18.54■□□□□ 0.56
ATF3P18847 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC18.54■□□□□ 0.56
ATF3P18847 EEF1GP1-201ENST00000457231 1299 ntBASIC18.54■□□□□ 0.56
ATF3P18847 DIS3L2P1-201ENST00000509197 559 ntBASIC18.54■□□□□ 0.56
ATF3P18847 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC18.54■□□□□ 0.56
ATF3P18847 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC18.54■□□□□ 0.56
ATF3P18847 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC18.54■□□□□ 0.56
ATF3P18847 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC18.54■□□□□ 0.56
ATF3P18847 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC18.54■□□□□ 0.56
ATF3P18847 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.54■□□□□ 0.56
ATF3P18847 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18.54■□□□□ 0.56
ATF3P18847 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATF3P18847 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF3P18847 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 FKBP4P1-201ENST00000507284 1347 ntBASIC18.53■□□□□ 0.56
ATF3P18847 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 PHBP3-201ENST00000412562 819 ntBASIC18.53■□□□□ 0.56
ATF3P18847 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF3P18847 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC18.53■□□□□ 0.56
ATF3P18847 RN7SL340P-201ENST00000470792 296 ntBASIC18.53■□□□□ 0.56
ATF3P18847 RN7SL16P-201ENST00000476316 269 ntBASIC18.53■□□□□ 0.56
ATF3P18847 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC18.53■□□□□ 0.56
ATF3P18847 IGHVII-33-1-201ENST00000524010 280 ntBASIC18.53■□□□□ 0.56
ATF3P18847 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF3P18847 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC18.53■□□□□ 0.56
ATF3P18847 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF3P18847 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC18.53■□□□□ 0.56
ATF3P18847 CYP4F10P-201ENST00000589560 752 ntBASIC18.53■□□□□ 0.56
ATF3P18847 AC009779.7-201ENST00000609031 469 ntBASIC18.53■□□□□ 0.56
ATF3P18847 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC18.53■□□□□ 0.56
ATF3P18847 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC18.53■□□□□ 0.56
ATF3P18847 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ATF3P18847 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.53■□□□□ 0.56
ATF3P18847 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATF3P18847 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
ATF3P18847 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATF3P18847 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF3P18847 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF3P18847 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATF3P18847 ERG-211ENST00000453032 1595 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF3P18847 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF3P18847 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF3P18847 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF3P18847 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF3P18847 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ATF3P18847 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ATF3P18847 IL6RP1-201ENST00000417848 1273 ntBASIC18.52■□□□□ 0.56
ATF3P18847 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC18.52■□□□□ 0.56
ATF3P18847 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF3P18847 AC022121.1-201ENST00000484584 579 ntBASIC18.52■□□□□ 0.56
ATF3P18847 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC18.52■□□□□ 0.56
ATF3P18847 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC18.52■□□□□ 0.56
ATF3P18847 PRDX2P3-201ENST00000515779 586 ntBASIC18.52■□□□□ 0.56
ATF3P18847 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATF3P18847 NAA38-204ENST00000575208 529 ntTSL 3 BASIC18.52■□□□□ 0.56
ATF3P18847 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC18.52■□□□□ 0.56
ATF3P18847 MIR6871-201ENST00000613433 56 ntBASIC18.52■□□□□ 0.56
ATF3P18847 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATF3P18847 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.52■□□□□ 0.55
ATF3P18847 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms