Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TRBV12-3P01733 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.72□□□□□ -0.69
TRBV12-3P01733 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC026316.1-201ENST00000398900 414 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC092506.1-202ENST00000401022 528 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 RN7SKP109-201ENST00000410592 316 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 GUSBP10-201ENST00000417412 665 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC018638.5-201ENST00000450885 754 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 STK24P1-201ENST00000455035 1291 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 RCC2P5-201ENST00000492126 1487 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 KRT8P2-201ENST00000556193 944 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AP005264.5-201ENST00000590066 467 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC016629.1-201ENST00000596579 586 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AC242376.2-201ENST00000619355 883 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TRBV12-3P01733 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.71□□□□□ -0.69
TRBV12-3P01733 AP001184.1-201ENST00000637936 376 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AL445250.1-201ENST00000641671 2259 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 AL805961.1-201ENST00000642026 753 ntBASIC10.71□□□□□ -0.69
TRBV12-3P01733 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TRBV12-3P01733 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
TRBV12-3P01733 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TRBV12-3P01733 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
TRBV12-3P01733 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
TRBV12-3P01733 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
TRBV12-3P01733 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
TRBV12-3P01733 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.71□□□□□ -0.7
TRBV12-3P01733 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.71□□□□□ -0.7
TRBV12-3P01733 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
TRBV12-3P01733 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.7□□□□□ -0.7
TRBV12-3P01733 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 AC245140.2-201ENST00000624054 1939 ntBASIC10.7□□□□□ -0.7
TRBV12-3P01733 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 Z98885.3-201ENST00000624882 1757 ntBASIC10.7□□□□□ -0.7
TRBV12-3P01733 AC108024.1-201ENST00000626286 1721 ntBASIC10.7□□□□□ -0.7
TRBV12-3P01733 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 AL359845.1-201ENST00000458202 1648 ntBASIC10.7□□□□□ -0.7
TRBV12-3P01733 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TRBV12-3P01733 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms