Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.38□□□□□ -0.43
ALX3O95076 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.38□□□□□ -0.43
ALX3O95076 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.38□□□□□ -0.43
ALX3O95076 AC090386.2-201ENST00000623010 1039 ntBASIC12.38□□□□□ -0.43
ALX3O95076 AC138951.2-201ENST00000623455 1161 ntBASIC12.38□□□□□ -0.43
ALX3O95076 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ALX3O95076 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
ALX3O95076 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.38□□□□□ -0.43
ALX3O95076 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
ALX3O95076 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
ALX3O95076 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.38□□□□□ -0.43
ALX3O95076 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.38□□□□□ -0.43
ALX3O95076 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.38□□□□□ -0.43
ALX3O95076 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
ALX3O95076 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.38□□□□□ -0.43
ALX3O95076 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.38□□□□□ -0.43
ALX3O95076 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ALX3O95076 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 SHMT1P1-201ENST00000419974 1312 ntBASIC12.37□□□□□ -0.43
ALX3O95076 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ALX3O95076 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.37□□□□□ -0.43
ALX3O95076 AC007551.1-201ENST00000457394 519 ntBASIC12.37□□□□□ -0.43
ALX3O95076 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.37□□□□□ -0.43
ALX3O95076 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.37□□□□□ -0.43
ALX3O95076 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.37□□□□□ -0.43
ALX3O95076 MIR4538-201ENST00000581377 78 ntBASIC12.37□□□□□ -0.43
ALX3O95076 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.37□□□□□ -0.43
ALX3O95076 AC133552.6-201ENST00000613406 534 ntBASIC12.37□□□□□ -0.43
ALX3O95076 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ALX3O95076 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.37□□□□□ -0.43
ALX3O95076 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ALX3O95076 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.37□□□□□ -0.43
ALX3O95076 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ALX3O95076 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.37□□□□□ -0.43
ALX3O95076 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms