Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.45□□□□□ -0.42
CHD8Q9HCK8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CHD8Q9HCK8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AL139220.1-201ENST00000436802 520 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 RN7SL559P-201ENST00000476501 297 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AC079601.2-201ENST00000547729 775 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AL669831.6-201ENST00000635557 837 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AC092471.1-202ENST00000637160 999 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AC011239.2-201ENST00000624820 1489 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 FTH1P19-201ENST00000402402 528 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 MTND6P7-201ENST00000433237 524 ntBASIC12.44□□□□□ -0.42
CHD8Q9HCK8 TMX3-202ENST00000443099 913 ntTSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 TNNT3-216ENST00000641119 941 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHD8Q9HCK8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AL354702.1-201ENST00000442006 1960 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TEDDM2P-201ENST00000414169 786 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AKIRIN1P2-201ENST00000440655 570 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 DDTP1-201ENST00000443589 383 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AP000926.2-201ENST00000469983 358 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TRMT112P6-201ENST00000599234 372 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC006547.1-207ENST00000601746 930 ntTSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC006547.1-210ENST00000609644 589 ntTSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 MTHFR-210ENST00000641407 2387 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms