Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 FAM223B-202ENST00000598177 713 ntBASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 FAM223A-202ENST00000625204 713 ntBASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC17.1■□□□□ 0.33
SHANK3Q9BYB0 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 ALMS1P1-201ENST00000428767 921 ntBASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AL391822.1-201ENST00000452580 562 ntBASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 RN7SL16P-201ENST00000476316 269 ntBASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 HINT1-204ENST00000506908 681 ntTSL 2 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AC103706.1-201ENST00000561761 679 ntBASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AC131274.3-201ENST00000578745 1271 ntBASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AL591926.3-201ENST00000611630 238 ntBASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AC015959.1-201ENST00000623263 1377 ntBASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHANK3Q9BYB0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHANK3Q9BYB0 AC000078.1-201ENST00000420617 682 ntBASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 AC012513.2-201ENST00000441511 1137 ntBASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 AC069181.1-201ENST00000498256 554 ntBASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHANK3Q9BYB0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 RPL7AP53-201ENST00000468834 793 ntBASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 FPGT-205ENST00000482102 561 ntTSL 4 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SHANK3Q9BYB0 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms